Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850484.1_cds_XP_016511174.1_23941
CDS Infomation

[gene=LOC107828400] [db_xref=GeneID:107828400] [protein=protein SIEVE ELEMENT OCCLUSION B-like isoform X3] [protein_id=XP_016511174.1] [location=complement(join(52061..52678,52749..53234,53324..53466,53679..53791,53942..54390,55090..55284))] [gbkey=CDS]
Sequence

ATGGCTAGTCATTCTTTAACAGCTAGGCCTCAGCCAGTAAGTAGGCGTGAACGTCCAGTT
TTCTCAATGTCTGATGATCATGCAATGTCCAAGAAAATCCTGAATACTCATTCTCCCAAT
GGTCGTGAAGTCGATGTGGACATCATCCTTCAAGTCATTGAGGGGATTTTTCAACATATC
CATGGCGCTTTACAGTTGACATGCAAGTTCTCAGGAGGAGGGGATGCCCATGCAACAACA
ATGGAAATCTTAGGGATGCTCTCTAGTTATCAATGGGATACAAAACTAGTCTTAACCTTG
GCATCATTTTCCATAATCTATGGAGAATTCTGGCTGGTAGCTCAGAAATTTGCTACTCAC
CCTTTGGCCAAAATGGTGGCTCTCTTGAAACAGCTACCTGATATAATTGAACATGCTGCT
GCTCTCAAGTCGCGATTCGATGCCATCAACAACCTCCTCAAAGCTATTTTGGACATAACC
AAATGCATCATTGAATTCAAGAGGCTTCCATCTCAGTACATCTCTGAAGATCAACCATCT
ATGTCTGTGGCTTTTGCCTACTTCCCTACTGCAGTTTATTGGACCATCAAAAGTATTGTC
GCTTGTGCTTCCCAGCTTACTAGCCTTCTTGGCATGAGTAATGAGTTGATATCAGCTACT
ACAACAGACACATGGGAAATGTCAAGCTCCACGCACAAGCTGAACAACATTAGTGATCAC
CTTAGAGCTGAATTGGAGCGTTGCTATGAACATATTCAGGAGAAGAAACATACAGAGTAT
TATCAAATGCTTGTGCACTTATTTGAGACAACCCAACTCGACAACATGAAGATAAACAAG
GCACTTATCTACATCAAAGATGATTTACTGCCACTTGAAGTTGGAACTATGCACACCAGG
GCCAATATTGACGTGCTGAGAAGAAAGACCGTCTTGCTGCTAATATCTGATCTTGATATT
ACCCCAGAAGAGGTATTAATACTTGCCACTGTCTACAATGAATCAAGAGGAAGGTCAGAA
CTTCAATACGAAATAGTGTGGCTTCCAATTTCTGATAGATCAAGGGAATGGAACGAAGGG
TACGAACACAAATTTAAAGAATTACAAGCACTTATGCCTTGGTACACATTGCACCATCCT
TCTTTGTTAGAGCCAGCAGCGATCAAGTTTGTCAAAGAAAGGTGGCATTTCTCTAAGAAG
ATGATGCTTGTAGCCTTAGATCCACAACAAGGTAAAGTGGTTTGTCAAAATGCAATCCAC
ATGGCTTGGATTTGGGGAAATTTGGCCTATCCATTCACTATGGCCAAACAAGATGAGCTC
TGGAGCATTGAGTCTTGGAGACTTGAGCTAGTAGTTGATGGCATCGATCAAAATATAATT
GAATGGATGACGGCGGGGAAGTATATCTGTCTATATGGAGGAGAAGACGTCGAATGGATA
GAAAAATTTACGACTTCTGCTAAAGGAGTGGCACATAGAGCTGGCATTGATCTGCATATG
ATCTATGTTGGAAAGAGCAGCAAAAAGGATCGAGTTCGCAGGATCAATATCATTATAAGA
AAAGAAAATCTAAGTTATTGCTTGGATGATGTGATGTCAGTTTGGTACTTTTGGAAAAGA
CTAGAGAGTATGTTCTATTCGAAAATGCAGTTAGGACAAACAATCAAAGATGACAAGATT
ATGCAAGAAGTGTTAACAATGTTGAGTTTTGATGGGAGTGATCAAGGATGGGTACTCATT
AGCAGAGGATCATTTGAGATGGCCAGAGCCAATAGTGTAGTAATAACTAAGACTTTGGAA
GATTTTCATGTTTGGGAAGAAGATGCAAGAGAAAAGGGATTTGTGTTAGCTCTTATTGAT
TACTTCCTTCATCTGCACACACCACAGCACTGCAATCGCCTAATTCTTCCGGGACTTGAT
GTGGACATTCCAGAAATGATAACGTGTGCTGAATGTGGGAGACCAATGGATAAGTTCTTC
ATGTATCGTTGCTGCACCGATTGA

Peptide Sequence

PEP ID

XP_016511174.1
PEP Infomation

PREDICTED: protein SIEVE ELEMENT OCCLUSION B-like isoform X3 [Nicotiana tabacum]
Sequence

MASHSLTARPQPVSRRERPVFSMSDDHAMSKKILNTHSPNGREVDVDIILQVIEGIFQHI
HGALQLTCKFSGGGDAHATTMEILGMLSSYQWDTKLVLTLASFSIIYGEFWLVAQKFATH
PLAKMVALLKQLPDIIEHAAALKSRFDAINNLLKAILDITKCIIEFKRLPSQYISEDQPS
MSVAFAYFPTAVYWTIKSIVACASQLTSLLGMSNELISATTTDTWEMSSSTHKLNNISDH
LRAELERCYEHIQEKKHTEYYQMLVHLFETTQLDNMKINKALIYIKDDLLPLEVGTMHTR
ANIDVLRRKTVLLLISDLDITPEEVLILATVYNESRGRSELQYEIVWLPISDRSREWNEG
YEHKFKELQALMPWYTLHHPSLLEPAAIKFVKERWHFSKKMMLVALDPQQGKVVCQNAIH
MAWIWGNLAYPFTMAKQDELWSIESWRLELVVDGIDQNIIEWMTAGKYICLYGGEDVEWI
EKFTTSAKGVAHRAGIDLHMIYVGKSSKKDRVRRINIIIRKENLSYCLDDVMSVWYFWKR
LESMFYSKMQLGQTIKDDKIMQEVLTMLSFDGSDQGWVLISRGSFEMARANSVVITKTLE
DFHVWEEDAREKGFVLALIDYFLHLHTPQHCNRLILPGLDVDIPEMITCAECGRPMDKFF
MYRCCTD

Transcript Sequence

Gene sequence data has not been registered.